MER6C (DF0000917)

TcMar-Tigger DNA transposon, MER6C subfamily (non-autonomous)

Description

MER6C is a deletion product of MER6. It has 25 bp TIRs and "TA" TSDs. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tigger

Hit Statistics

The model is 202 positions long. The average length of non-redundant hits to the model is 148. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 223 3880 204 3329

External Database Links

  • Repbase : MER6C [Requires Repbase registration]