MER63B (DF0000894)

hAT-Blackjack DNA transposon, MER63B subfamily

Description

MER63B is an internally deleted hAT DNA transposon, with 15 bp TIRs and 8 bp TSDs. Related subfamilies differ by size. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Blackjack

Hit Statistics

The model is 436 positions long. The average length of non-redundant hits to the model is 263.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 730 2945 496 1613
Homo sapiens 1127 9718 1005 7614

External Database Links

  • Repbase : MER63B [Requires Repbase registration]