Tigger1 (DF0000891)

TcMar-Tigger DNA transposon, Tigger1 subfamily (autonomous)


Tigger1 has 23 bp TIRs, TSDs are "TA". ORF1: roughly over 425..1789; ORF2: roughly over 1811..2206.


  1. Dense Alu clustering and a potential new member of the NF kappa B family within a 90 kilobase HLA class III segment.
    Iris FJ, Bougueleret L, Prieur S, Caterina D, Primas G, Perrot V, Jurka J, Rodriguez-Tome P, Claverie JM, Dausset J;
    Nat Genet 1993;3:137-145 Pubmed

  2. Structure of the human CRFB4 gene: comparison with its IFNAR neighbor.
    Lutfalla G, McInnis MG, Antonarakis SE, Uzé G;
    J Mol Evol 1995;41:338-344 Pubmed

  3. Tiggers and DNA transposon fossils in the human genome.
    Smit AF, Riggs AD;
    Proc Natl Acad Sci U S A 1996;93:1443-1448 Pubmed


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tigger

Hit Statistics

The model is 2418 positions long. The average length of non-redundant hits to the model is 922.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 629 943 540 763
Homo sapiens 9098 13801 8989 13225

External Database Links

  • Repbase : TIGGER1 [Requires Repbase registration]