MER58D (DF0000875)

hAT-Charlie DNA transposon, MER58D subfamily

Description

Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 386 positions long. The average length of non-redundant hits to the model is 161.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 264 2108 141 395
Homo sapiens 808 28414 545 11675

External Database Links

  • Repbase : MER58D [Requires Repbase registration]