MER58C (DF0000874)

hAT-Charlie DNA transposon, MER58C subfamily

Description

Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 215 positions long. The average length of non-redundant hits to the model is 147.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 795 3667 357 1198
Homo sapiens 3422 25841 2724 19402

External Database Links

  • Repbase : MER58C [Requires Repbase registration]