MER58B (DF0000873)

hAT-Charlie DNA transposon, MER58B subfamily

Description

MER58B is 94% identical to the entire length of CHESHIRE_B. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: CHESHIRE_B

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 341 positions long. The average length of non-redundant hits to the model is 248.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 2350 9480 1750 5284
Homo sapiens 4339 32334 4108 23131

External Database Links

  • Repbase : MER58B [Requires Repbase registration]