MER58A (DF0000872)

hAT-Charlie DNA transposon, MER58A subfamily


MER58A is a double deletion product of Cheshire. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: CHESHIRE_A


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 224 positions long. The average length of non-redundant hits to the model is 188.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 5981 9155 4028 5466
Homo sapiens 12177 26345 11591 21100

External Database Links

  • Repbase : CHESHIRE_A [Requires Repbase registration]