MER57B1 (DF0000865)

MER57B1 Long Terminal Repeat for ERV1 endogenous retrovirus

Description

The MER57B1 LTR may be simian-specific (present in marmoset). Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 401 positions long. The average length of non-redundant hits to the model is 335.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 780 4789 703 3989

External Database Links

  • Repbase : MER57B1 [Requires Repbase registration]