MER52-int (DF0000855)

Internal region of ERV1 endogenous retrovirus, MER52-int subfamily

Description

Associated with MER52A LTRs, forming an apparently autonomous ERV. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: MER52AI

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 7091 positions long. The average length of non-redundant hits to the model is 683.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 375 8139 208 4437
Homo sapiens 558 12040 495 9775

External Database Links

  • Repbase : MER52AI [Requires Repbase registration]