Tigger7 (DF0000851)

TcMar-Tigger DNA transposon, Tigger7 subfamily (autonomous)

Description

Tigger7 has 23 bp TIRs, and "TA" TSDs. The transposase is most similar to Tigger2. Non-autonomous internal deletions of Tigger7 include the MER44A/B/C/D subfamilies.

References

  1. Tiggers and DNA transposon fossils in the human genome.
    Smit AF, Riggs AD;
    Proc Natl Acad Sci U S A 1996;93:1443-1448 Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tigger

Hit Statistics

The model is 2492 positions long. The average length of non-redundant hits to the model is 340.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 2026 17192 1988 14310

External Database Links

  • Repbase : TIGGER7 [Requires Repbase registration]