Tigger6b (DF0000850)
TcMar-Tigger DNA transposon, Tigger6b subfamily (non-autonomous)
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Tigger6b has 23bp TIRs, and "TA" TSDs. Both this and Tigger6a are deletions of an autonomous element that has yet to be reconstructed (to be called Tigger6).
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | TcMar-Tigger |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1597 positions long. The average length of non-redundant hits to the model is 337.6. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Mus musculus | 35 | 490 | 28 | 373 |
| Homo sapiens | 125 | 1488 | 115 | 1284 |
External Database Links
- Repbase : TIGGER6B [Requires Repbase registration]