Tigger2 (DF0000836)
TcMar-Tigger DNA transposon, Tigger2 subfamily (autonomous)
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Tigger2 has 24 bp TIRs and "TA" TSDs. MER28 is a component of this autonomous Tigger element.
References
-
Tiggers and DNA transposon fossils in the human genome.
Smit AF, Riggs AD;
Proc Natl Acad Sci U S A 1996;93:1443-1448 Pubmed
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | TcMar-Tigger |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 2718 positions long. The average length of non-redundant hits to the model is 796.9. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Homo sapiens | 1845 | 16629 | 1796 | 13541 |
External Database Links
- Repbase : TIGGER2 [Requires Repbase registration]