THE1B Long Terminal Repeat for ERVL-MaLR endogenous retrovirus
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
An LTR of the THE1B retrovirus-like MaLR element. Has 5 bp TSDs. This subfamily is an intermediate between THE1A and THE1C, and is 90% similar to both over the entire length.
Non-Alu family interspersed repeats in human DNA and their transcriptional activity.
Sun L, Paulson KE, Schmid CW, Kadyk L, Leinwand L;
Nucleic Acids Res 1984;12:2669-2690 Pubmed
A transposon-like element in human DNA.
Paulson KE, Deka N, Schmid CW, Misra R, Schindler CW, Rush MG, Kadyk L, Leinwand L;
Nature 1985;316:359-361 Pubmed
Identification of a new, abundant superfamily of mammalian LTR-transposons.
Nucleic Acids Res 1993;21:1863-1872 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 364 positions long. The average length of non-redundant hits to the model is 344.9. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : THE1B [Requires Repbase registration]