MER4D (DF0000801)

MER4D Long Terminal Repeat for ERV1 endogenous retrovirus

Description

MER4D is a MER4 variant characterized by a 192 bp insertion between roughly positions 191-193 of MER4B. Originally, MER4D contained a chimaeric 5' end. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: MER4D_LTR

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 903 positions long. The average length of non-redundant hits to the model is 495.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 1006 14482 961 13525

External Database Links

  • Repbase : MER4D_LTR [Requires Repbase registration]