MER49 (DF0000794)

MER49 Long Terminal Repeat for ERV1 endogenous retrovirus


LTR associated with MER4-int. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 923 positions long. The average length of non-redundant hits to the model is 516.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 987 6454 947 5907

External Database Links

  • Repbase : MER49 [Requires Repbase registration]