MER45B (DF0000786)

hAT-Tip100 DNA transposon, MER45B subfamily (non-autonomous)

Description

Has 15 bp TIR, 8 bp TSD. Initially reported in the opposite orientation. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 1040 positions long. The average length of non-redundant hits to the model is 406.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 514 1580 399 731
Homo sapiens 971 8556 878 6228

External Database Links

  • Repbase : MER45B [Requires Repbase registration]