MARNA (DF0000779)

TcMar-Mariner DNA transposon, MARNA subfamily (non-autonomous)

Description

Retains a partial protein similarity to mariner transposase. Currently 190 bp TIRs, but the ends are still uncertain as copies have variably-truncated termini.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Mariner

Hit Statistics

The model is 586 positions long. The average length of non-redundant hits to the model is 275.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 657 985 362 489
Homo sapiens 3286 7006 2491 4438

External Database Links

  • Repbase : MARNA [Requires Repbase registration]