L1MEc_5end (DF0000776)

5' end of L1 retrotransposon, L1MEc_5end subfamily

Description

5' end of LINE elements with L1ME1-2 subfamily 3' ends, comprising the 5' UTR, ORF1 (pos. 793-1771 or more) and part of ORF2.

Synonyms: L1MEC_5

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2527 positions long. The average length of non-redundant hits to the model is 605. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 4510 92426 3128 74927
Homo sapiens 10178 136887 9511 116548

External Database Links

  • Repbase : L1MEC_5 [Requires Repbase registration]