L1MEb_5end (DF0000774)

Partial 5' end of L1 retrotransposon, L1MEb_5end subfamily

Description

5' end of L1ME1 or L1ME2 LINE1. Average divergence from consensus is 26%. L1MEB_5 is 70% similar to L1MDA_5 sequence.

Synonyms: L1MEB_5

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 1089 positions long. The average length of non-redundant hits to the model is 392.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 918 5352 495 2056
Homo sapiens 3027 64316 2466 40705

External Database Links

  • Repbase : L1MEB_5 [Requires Repbase registration]