MER41-int (DF0000765)

Internal region of ERV1 endogenous retrovirus, MER41-int subfamily

Description

MER41-int is associated with MER41 LTRs. The reconstruction of MER41-int is incomplete. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: MER41I

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 5946 positions long. The average length of non-redundant hits to the model is 902.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 990 16420 939 13160

External Database Links

  • Repbase : MER41I [Requires Repbase registration]