MER34C_v (DF0000754)

Extension of MER34C Long Terminal Repeat for ERV1 endogenous retrovirus

Description

Differs from MER34C by a 35 bp duplication at the 5' end. Possibly also in rodents. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 585 positions long. The average length of non-redundant hits to the model is 331. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 248 857 195 504
Homo sapiens 459 9514 409 5685

External Database Links

None recorded for this entry