hAT-Charlie DNA transposon, MER113A subfamily
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Termini essentially match the termini of MER113. Central regions unrelated, probably different parts of the autonomous Charlie element. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 314 positions long. The average length of non-redundant hits to the model is 203.6. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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