MER110-int (DF0000707)

Internal region of ERV1 endogenous retrovirus, MER110-int subfamily

Description

Associated with MER110 or MER110A LTRs. This reconstruction may miss a large fragment towards the 5' end. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Synonyms: MER110I

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 4647 positions long. The average length of non-redundant hits to the model is 629.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 157 4546 90 1863
Homo sapiens 350 4728 307 2700

External Database Links

  • Repbase : MER110I [Requires Repbase registration]