MER110A (DF0000706)

MER110A Long Terminal Repeat for ERV1 endogenous retrovirus

Description

Similar to MER110 in the 3' region, and more modestly, to MER90a across that same region. Note that MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 468 positions long. The average length of non-redundant hits to the model is 322.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 177 255 133 180
Homo sapiens 459 1174 424 1025

External Database Links

  • Repbase : MER110A [Requires Repbase registration]