MER103C (DF0000699)

hAT-Charlie DNA transposon, MER103C subfamily

Description

This element may be a composite of 2 non-autonomous transposons inserted one into another. MER103B is an internal deletion product of Charlie14, but there are few copies, if any, that show evidence of independent proliferation (e.g. the NTCTAGAN target site signature is only found at one site). MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 297 positions long. The average length of non-redundant hits to the model is 212.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1598 1866 699 767
Homo sapiens 9867 17199 7362 9809

External Database Links