hAT-Charlie DNA transposon, MER103C subfamily
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
This element may be a composite of 2 non-autonomous transposons inserted one into another. MER103B is an internal deletion product of Charlie14, but there are few copies, if any, that show evidence of independent proliferation (e.g. the NTCTAGAN target site signature is only found at one site). MER stands for MEdium Reiteration frequency interspersed repeat. As such, MERs as a group are a grab bag of DNA transposons and retrotransposons.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 297 positions long. The average length of non-redundant hits to the model is 212.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|