L1ME3Cz_3end (DF0000635)

3' end of L1 retrotransposon, L1ME3Cz_3end subfamily

Description

1-873 96% identical to the full L1ME3C_3end consensus, but, reminiscent of L1ME2z_3end, with an extension 880-997 (end) corresponding 84% to the 3end of L1MC4_3end.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 997 positions long. The average length of non-redundant hits to the model is 338.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1874 172132 917 141212
Homo sapiens 7379 322000 5474 263547

External Database Links

None recorded for this entry