This model represents a noncoding RNA gene. Some ncRNA genes have transformed into, or become assimilated into transposons. Others occur in sufficient copy number that ab initio repeat finders may classify them as repetitive elements. This entry is used to correctly identify the gene and its pseudogenes and prevent misannotation.
hY3 Y scRNA gene / pseudogene
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Human HY3 scRNA gene and related pseudogenes.
Genes for two small cytoplasmic Ro RNAs are adjacent and appear to be single-copy in the human genome.
Wolin SL, Steitz JA;
Cell 1983;32:735-744 Pubmed
Chromosomal protein HMG-14. Identification, characterization, and chromosome localization of a functional gene from the large human multigene family.
Landsman D, McBride OW, Soares N, Crippa MP, Srikantha T, Bustin M;
J Biol Chem 1988;264:3421-3427 Pubmed
Prototypic sequences for human repetitive DNA.
Jurka J, Walichiewicz J, Milosavljevic A;
J Mol Evol 1992;35:286-291 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 101 positions long. The average length of non-redundant hits to the model is 94.5. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HY3 [Requires Repbase registration]