Charlie7 (DF0000627)

hAT-Charlie DNA transposon, Charlie7 subfamily

Description

14bp TIR. TSD: NTCTAGAN. ORF at roughly pos. 591-2354.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2615 positions long. The average length of non-redundant hits to the model is 406.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 777 1196 478 599
Homo sapiens 1938 6721 1574 3968

External Database Links

  • Repbase : CHARLIE7 [Requires Repbase registration]