L1PA3_3end (DF0000340)

3' end of L1 retrotransposon, L1PA3_3end subfamily


ORF2 ends at bp ~684

Synonyms: L1PA3


  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 902 positions long. The average length of non-redundant hits to the model is 597.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 4241 255757 4027 214201

External Database Links

  • Repbase : L1PA3 [Requires Repbase registration]