L1PA15-16_5end (DF0000334)

5' end of L1 retrotransposon, L1PA15-16_5end subfamily

Description

The 5' UTR region from 733 to 1238 contains 4+ copies of a ~113 bp tandem repeat unit. (These occur in variable numbers.)

Synonyms: L1PA16_5

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2962 positions long. The average length of non-redundant hits to the model is 777.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 1769 81905 1561 63305

External Database Links

  • Repbase : L1PA16_5 [Requires Repbase registration]