L1PA13_5end (DF0000332)

5' end of L1 retrotransposon, L1PA13_5end subfamily


L1PA13_5end represents the 5' end of L1PA13 (mostly) & L1PA15 LINE1 elements. ORF1 starts at pos. 1667.

Synonyms: L1PA13_5


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2881 positions long. The average length of non-redundant hits to the model is 1243.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 1413 69735 1346 52773

External Database Links

  • Repbase : L1PA13_5 [Requires Repbase registration]