L1PA13_3end (DF0000331)

3' end of L1 retrotransposon, L1PA13_3end subfamily


ORF2 ends at bp ~684

Synonyms: L1PA13


  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 910 positions long. The average length of non-redundant hits to the model is 493.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 4967 274174 4844 236849

External Database Links

  • Repbase : L1PA13 [Requires Repbase registration]