L1MEj_5end (DF0000314)

5' end of L1 retrotransposon, L1MEj_5end subfamily


Contains a Gag ORF1 (~510-1385); the Pol ORF2 starts at ~2011.


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2160 positions long. The average length of non-redundant hits to the model is 407. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 545 76844 247 57295
Homo sapiens 2433 107013 1866 83150

External Database Links

None recorded for this entry