L1MEf_5end (DF0000308)

5' end of L1 retrotransposon, L1MEf_5end subfamily


L1MEf_5end encodes a complete gag (ORF1) protein: ~634-1593.


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2217 positions long. The average length of non-redundant hits to the model is 564.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 1960 91867 1230 69656
Homo sapiens 5516 139371 4933 118191

External Database Links

  • Repbase : L1MEf_5end [Requires Repbase registration]