L1ME2_3end (DF0000294)

3' end of L1 retrotransposon, L1ME2_3end subfamily

Description

There is currently no description for this model. Contribute annotation?

Synonyms: L1ME2

References

  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed

  2. Dense Alu clustering and a potential new member of the NF kappa B family within a 90 kilobase HLA class III segment.
    Iris FJ, Bougueleret L, Prieur S, Caterina D, Primas G, Perrot V, Jurka J, Rodriguez-Tome P, Claverie JM, Dausset J;
    Nat Genet 1993;3:137-145 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 911 positions long. The average length of non-redundant hits to the model is 382.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 3715 193075 2501 160072
Homo sapiens 6618 332890 5899 282559

External Database Links

  • Repbase : L1ME2 [Requires Repbase registration]