L1ME1_3end (DF0000293)

3' end of L1 retrotransposon, L1ME1_3end subfamily

Description

There is currently no description for this model. Contribute annotation?

Synonyms: L1ME1

References

  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 926 positions long. The average length of non-redundant hits to the model is 411.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 6156 193591 4381 160622
Homo sapiens 13982 335746 12503 283782

External Database Links

  • Repbase : L1ME1 [Requires Repbase registration]