L1MDb_5end (DF0000291)

5' end of L1 retrotransposon, L1MDb_5end subfamily

Description

ORF1: ~937 to end

Synonyms: L1MDB_5

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 1422 positions long. The average length of non-redundant hits to the model is 324.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 394 2073 275 1133
Homo sapiens 1797 50754 1116 28007

External Database Links

  • Repbase : L1MDB_5 [Requires Repbase registration]