L1MC_orf2 (DF0000285)
ORF2 from L1 retrotransposon, L1MC_orf2 subfamily
Description
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Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | Retrotransposon | Article |
| Class | LINE | |
| Superfamily | L1 |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3294 positions long. The average length of non-redundant hits to the model is 610. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Mus musculus | 4795 | 197602 | 3434 | 162408 |
| Homo sapiens | 8709 | 300622 | 7739 | 260553 |
External Database Links
None recorded for this entry