L1MA3_3end (DF0000258)

3' end of L1 retrotransposon, L1MA3_3end subfamily

Description

ORF2 ends at bp ~684

Synonyms: L1MA3

References

  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 1052 positions long. The average length of non-redundant hits to the model is 510. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 3583 288168 3328 249452

External Database Links

  • Repbase : L1MA3 [Requires Repbase registration]