L1M4c_5end (DF0000249)

5' end of L1 retrotransposon, L1M4c_5end subfamily

Description

ORF1 open reading frame from pos ~782 to 1765, ORF2 starts at pos ~2346.

Synonyms: L1MB3_5

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2500 positions long. The average length of non-redundant hits to the model is 566.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 4217 92162 3345 76091
Homo sapiens 4059 122106 3757 102042

External Database Links

  • Repbase : L1MB3_5 [Requires Repbase registration]