Long Terminal Repeat for PABL_A endogenous retrovirus
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
PABL_A is the LTR associated with PABL_A-int.
A boundary of long-range G + C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary.
Fukagawa T, Sugaya K, Matsumoto K, Okumura K, Ando A, Inoko H, Ikemura T;
Genomics 1995;25:184-191 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 660 positions long. The average length of non-redundant hits to the model is 534.6. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : PABL_A [Requires Repbase registration]