L1HS_5end (DF0000226)

5' end of L1 retrotransposon, L1HS_5end subfamily


Currently active in human genome.

Synonyms: L1HS


  1. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences.
    Smit AF, Tóth G, Riggs AD, Jurka J;
    J Mol Biol 1995;246:401-417 Pubmed


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily L1

Hit Statistics

The model is 2136 positions long. The average length of non-redundant hits to the model is 809.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 3144 70204 3087 51602

External Database Links

  • Repbase : L1HS [Requires Repbase registration]