HUERS-P3 (DF0000216)

Internal region of ERV1 endogenous retrovirus, HUERS-P3 subfamily

Description

HUERS-P3 contains full-length gag and pol ORFs, and is associated with LTR9 long terminal repeats. Many apparently non-autonomous elements containing differing amounts of MER4-type and HUERS-P3-like internal sequences exist (see e.g. HUERS-P3b), suggesting that HUERS-P3 was one of the engines for the distribution of the MER4-group elements.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 8919 positions long. The average length of non-redundant hits to the model is 912.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 566 12256 529 9562

External Database Links

  • Repbase : HUERS-P3 [Requires Repbase registration]