Internal region of ERV1 endogenous retrovirus, HUERS-P2 subfamily
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
This sequence is associated with LTR1 long terminal repeats. It seems to have encoded only a gag-like protein similar to that of HUERS-P3, and was thus presumably a nonautonomous element.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3088 positions long. The average length of non-redundant hits to the model is 1038.5. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HUERS-P2 [Requires Repbase registration]