HSATII (DF0000211)
HSATII Human satellite II
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
HSATII is a 170bp satellite; this profile is a single repeat unit long.
References
-
Sequence relationships of three human satellite DNAs.
Prosser J, Frommer M, Paul C, Vincent PC;
J Mol Biol 1986;187:145-155 Pubmed
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | Satellite | Article |
| Class | Satellite | Article |
| Superfamily | Undefined |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 170 positions long. The average length of non-redundant hits to the model is 170.5. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Homo sapiens | 7558 | 14898 | 7210 | 14072 |
External Database Links
- Repbase : HSATII [Requires Repbase registration]