HSAT6 Human centromeric satellite 6
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
HSAT6 42bp satellite associated with human centromeres. Profile represents three tandem copies. A single 42bp repat unit contains two 18bp long satellite-like subunits (TATTATGACATCACAATA) and one partial palindrome (single subunit positions: 3-19 and 36-20).
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 126 positions long. The average length of non-redundant hits to the model is 122.5. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HSAT6 [Requires Repbase registration]