HSAT6 (DF0000209)

HSAT6 Human centromeric satellite 6

Description

HSAT6 42bp satellite associated with human centromeres. Profile represents three tandem copies. A single 42bp repat unit contains two 18bp long satellite-like subunits (TATTATGACATCACAATA) and one partial palindrome (single subunit positions: 3-19 and 36-20).

Classification

Accession Name Wikipedia
Type Satellite Article
Class Satellite Article
Superfamily Undefined

Hit Statistics

The model is 126 positions long. The average length of non-redundant hits to the model is 122.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 31 102 27 76

External Database Links

  • Repbase : HSAT6 [Requires Repbase registration]