HERVS71 (DF0000205)

Internal region of ERV1 endogenous retrovirus, HERVS71 subfamily

Description

The associated long terminal repeats are LTR6A and LTR6B.

References

  1. S71 is a phylogenetically distinct human endogenous retroviral element with structural and sequence homology to simian sarcoma virus (SSV).
    Werner T, Brack-Werner R, Leib-Moesch C, Backhaus H, Erfle V, Hehlmann R;
    Virology 1990;174:225-238 Pubmed

  2. Human endogenous retrovirus HC2 is a new member of the S71 retroviral subgroup with a full-length pol gene.
    Kabat P, Tristem M, Opavsky R, Pastorek J;
    Virology 1996;226:83-94 Pubmed

  3. Identification of endogenous retroviral sequences based on modular organization: proviral structure at the SSAV1 locus.
    Blusch JH, Haltmeier M, Frech K, Sander I, Leib-Mosch C, Brack-Werner R, Werner T;
    Genomics 1997;43:52-61 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 8978 positions long. The average length of non-redundant hits to the model is 2063.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 169 5683 150 4761

External Database Links

  • Repbase : HERVS71 [Requires Repbase registration]