HERVP71A (DF0000204)

Internal region of ERV1 endogenous retrovirus, HERVP71A subfamily


The associated long terminal repeats are LTR71A and -B, and have 5 bp TSDs. The reconstructed autonomous HERVP71A has 3 ORFS: 518aa gag (461-2017), 1167aa pol (~2018-5521) and env (~5553-7574). The pol gene contains protease (140aa), reverse transcriptase (517aa), RNase H (140aa) and endonuclease (270aa) domains.

Synonyms: HERVP71A_I


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 7590 positions long. The average length of non-redundant hits to the model is 1102.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 258 7211 202 4813

External Database Links

  • Repbase : HERVP71A_I [Requires Repbase registration]