HERVK3 (DF0000195)

Internal region of HERVK endogenous retrovirus, HERVK3 subfamily

Description

The associated long terminal repeat is LTR3, and has 6 bp TSDs.

Synonyms: HERVK3I

References

  1. Structure and genomic organization of a novel human endogenous retrovirus family: HERV-K (HML-6).
    Medstrand P, Mager DL, Yin H, Dietrich U, Blomberg J;
    J Gen Virol 1997;78:1731-1744 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVK Article

Hit Statistics

The model is 7202 positions long. The average length of non-redundant hits to the model is 1063.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 361 2117 298 1593

External Database Links

  • Repbase : HERVK3I [Requires Repbase registration]