Internal region of HERVK endogenous retrovirus, HERVK3 subfamily
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The associated long terminal repeat is LTR3, and has 6 bp TSDs.
Structure and genomic organization of a novel human endogenous retrovirus family: HERV-K (HML-6).
Medstrand P, Mager DL, Yin H, Dietrich U, Blomberg J;
J Gen Virol 1997;78:1731-1744 Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 7202 positions long. The average length of non-redundant hits to the model is 1063.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HERVK3I [Requires Repbase registration]