HERVK11D (DF0000190)

Internal region of ERVK endogenous retrovirus, HERVK11D subfamily

Description

The associated long terminal repeat is MER11D, and has 6 bp TSDs. HERVK11D encodes 4 proteins: gag (~162-2027), protease (~1985-3032), pol (~3113-5590) and env (~5804-7750).

Synonyms: HERVK11DI

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVK Article

Hit Statistics

The model is 7752 positions long. The average length of non-redundant hits to the model is 1180.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 100 2365 92 1883

External Database Links

  • Repbase : HERVK11DI [Requires Repbase registration]